*ALL-IN fares includes taxes, fees, and surcharges except applicable Philippine Travel Tax which at passenger's option can be added separately during or after the booking.
Manila to Japan Flights on Philippine Airlines from USD 125* ALL-IN!
Enjoy amazing fare deals from Manila Japan!

Manila (MNL)to
Nagoya (NGO)
Manila (MNL)to
Nagoya (NGO)
Manila (MNL)to
Fukuoka (FUK)
Manila (MNL)to
Fukuoka (FUK)
Manila (MNL)to
Osaka (KIX)
Manila (MNL)to
Tokyo (NRT)
Manila (MNL)to
Tokyo (NRT)
Manila (MNL)to
Tokyo (TYO)
Manila (MNL)to
Tokyo (HND)
Manila (MNL)to
Tokyo (HND)
Manila (MNL)to
Osaka (KIX)
Manila (MNL)to
Tokyo (TYO)
Manila (MNL)to
Okinawa (OKA)
Manila (MNL)to
Kagoshima (KOJ)
Manila (MNL)to
Sapporo (CTS)
Manila (MNL)to
Sapporo (CTS)Fares displayed have been collected within the last 48hrs and may no longer be available at time of booking. Quoted fares includes taxes, fees, and surcharges except PH Travel Tax which is added at the passenger's option during or after the booking.
Enjoy amazing Business Class fares Manila Japan!
Fares displayed have been collected within the last 48hrs and may no longer be available at time of booking. Quoted fares includes taxes, fees, and surcharges except PH Travel Tax which is added at the passenger's option during or after the booking.
Fly with PAL - Popular Flights from Manila to Japan
From | To | Fare Type | Dates | Price |
---|---|---|---|---|
Manila (MNL) | Sapporo (CTS) | Round-trip / Economy | 25 Feb 2026 - 02 Mar 2026 | From USD 125 Seen: 1 hour ago |
Manila (MNL) | Nagoya (NGO) | Round-trip / Economy | 23 Nov 2025 - 28 Nov 2025 | From USD 213 Seen: 1 hour ago |
Manila (MNL) | Nagoya (NGO) | Round-trip / Economy | 16 May 2026 - 24 May 2026 | From USD 213 Seen: 4 hrs ago |
Manila (MNL) | Tokyo (NRT) | Round-trip / Economy | 12 Sep 2025 - 15 Sep 2025 | From USD 246 Seen: 1 day ago |
Manila (MNL) | Fukuoka (FUK) | Round-trip / Economy | 11 Oct 2025 - 16 Oct 2025 | From USD 299 Seen: 11 hrs ago |
Manila (MNL) | Fukuoka (FUK) | Round-trip / Economy | 08 Nov 2025 - 07 Dec 2025 | From USD 299 Seen: 11 hrs ago |
Manila (MNL) | Tokyo (NRT) | Round-trip / Economy | 04 Oct 2025 - 06 Oct 2025 | From USD 306 Seen: 6 hrs ago |
Manila (MNL) | Tokyo (TYO) | Round-trip / Economy | 05 Dec 2025 - 12 Dec 2025 | From USD 313 Seen: 10 hrs ago |
Manila (MNL) | Tokyo (TYO) | Round-trip / Economy | 08 Nov 2025 - 13 Nov 2025 | From USD 313 Seen: 3 hrs ago |
Manila (MNL) | Tokyo (HND) | Round-trip / Economy | 08 Nov 2025 - 15 Nov 2025 | From USD 313 Seen: 5 hrs ago |
Manila (MNL) | Tokyo (HND) | Round-trip / Economy | 19 Oct 2025 - 22 Oct 2025 | From USD 313 Seen: 3 hrs ago |
Manila (MNL) | Sapporo (CTS) | Round-trip / Economy | 17 Jan 2026 - 21 Jan 2026 | From USD 313 Seen: 3 hrs ago |
Manila (MNL) | Osaka (KIX) | Round-trip / Economy | 05 Oct 2025 - 11 Oct 2025 | From USD 324 Seen: 1 day ago |
Manila (MNL) | Osaka (KIX) | Round-trip / Economy | 20 Feb 2026 - 24 Feb 2026 | From USD 336 Seen: 8 hrs ago |
Manila (MNL) | Okinawa (OKA) | Round-trip / Economy | 16 Jan 2026 - 19 Jan 2026 | From USD 464 Seen: 1 day ago |
Manila (MNL) | Okinawa (OKA) | Round-trip / Economy | 24 Jan 2026 - 31 Jan 2026 | From USD 464 Seen: 1 day ago |
Manila (MNL) | Akita (AXT) | Round-trip / Economy | 05 May 2026 - 12 May 2026 | From USD 715 Seen: 1 day ago |
Manila (MNL) | Kochi (KCZ) | Round-trip / Economy | 23 Dec 2025 - 04 Jan 2026 | From USD 1,415 Seen: 1 day ago |
*Fares displayed have been collected within the last 48hrs and may no longer be available at time of booking. Fares are quoted with taxes, fees, and surcharges except PH Travel Tax paid at the airport.
Our Most Searched Flights on PAL from Manila to Japan
Manila (MNL)to
Nagoya (NGO)Manila (MNL)to
Nagoya (NGO)Manila (MNL)to
Fukuoka (FUK)Manila (MNL)to
Fukuoka (FUK)Manila (MNL)to
Osaka (KIX)Manila (MNL)to
Tokyo (NRT)Manila (MNL)to
Tokyo (NRT)Manila (MNL)to
Tokyo (TYO)Manila (MNL)to
Tokyo (HND)Manila (MNL)to
Tokyo (HND)Manila (MNL)to
Osaka (KIX)Manila (MNL)to
Tokyo (TYO)Manila (MNL)to
Okinawa (OKA)Manila (MNL)to
Sapporo (CTS)Manila (MNL)to
Kagoshima (KOJ)Manila (MNL)to
Akita (AXT)Manila (MNL)to
Sapporo (CTS)*Fares displayed have been collected within the last 48hrs and may no longer be available at time of booking. Quoted fares includes taxes, fees, and surcharges except PH Travel Tax paid at the airport.
