Discover Manila to Japan Flights with Philippine Airlines

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*ALL-IN fares includes taxes, fees, and surcharges except applicable Philippine Travel Tax which at passenger's option can be added separately during or after the booking.

Popular PAL flight deals from Manila to Japan!

Manila (MNL)to

Nagoya (NGO)
06 Oct 2026 - 08 Oct 2026

Round-trip

Economy

From
USD 310
Seen: 23 hrs ago

Manila (MNL)to

Nagoya (NGO)
09 Oct 2026 - 14 Oct 2026

Round-trip

Economy

From
USD 310
Seen: 12 hrs ago

Manila (MNL)to

Tokyo (NRT)
23 Oct 2026 - 02 Nov 2026

Round-trip

Economy

From
USD 323
Seen: 20 hrs ago

Manila (MNL)to

Tokyo (NRT)
06 Dec 2026 - 11 Dec 2026

Round-trip

Economy

From
USD 340
Seen: 4 hrs ago

Manila (MNL)to

Osaka (KIX)
09 Dec 2026 - 14 Dec 2026

Round-trip

Economy

From
USD 353
Seen: 1 day ago

Manila (MNL)to

Osaka (KIX)
28 Nov 2026 - 03 Dec 2026

Round-trip

Economy

From
USD 353
Seen: 1 day ago

Manila (MNL)to

Fukuoka (FUK)
11 Nov 2026 - 18 Nov 2026

Round-trip

Economy

From
USD 356
Seen: 1 day ago

Manila (MNL)to

Fukuoka (FUK)
06 Dec 2026 - 10 Dec 2026

Round-trip

Economy

From
USD 356
Seen: 1 day ago

Manila (MNL)to

Tokyo (HND)
11 Oct 2026 - 21 Oct 2026

Round-trip

Economy

From
USD 410
Seen: 1 day ago

Manila (MNL)to

Tokyo (HND)
05 Nov 2026 - 12 Nov 2026

Round-trip

Economy

From
USD 425
Seen: 1 day ago

Manila (MNL)to

Sapporo (CTS)
24 Nov 2026 - 28 Nov 2026

Round-trip

Economy

From
USD 517
Seen: 8 hrs ago

Manila (MNL)to

Sapporo (CTS)
02 Dec 2026 - 05 Dec 2026

Round-trip

Economy

From
USD 577
Seen: 11 hrs ago

Manila (MNL)to

Okinawa (OKA)
23 Nov 2026 - 07 Dec 2026

Round-trip

Economy

From
USD 900
Seen: 1 day ago

Manila (MNL)to

Toyama (TOY)
02 Nov 2026 - 08 Nov 2026

Round-trip

Economy

From
USD 952
Seen: 1 day ago
Fares displayed have been collected within the last 48hrs and may no longer be available at time of booking. Quoted fares includes taxes, fees, and surcharges except PH Travel Tax which is added at the passenger's option during or after the booking.

Popular PAL Business Class flight deals from Manila to Japan

  • Manila (MNL)to

    Tokyo (NRT)
    19 Nov 2026 - 23 Nov 2026
    From
    USD 1,060
    Seen: 10 hrs ago
    Round-trip
    Business

    Manila (MNL)to

    Tokyo (HND)
    21 Nov 2026 - 26 Nov 2026
    From
    USD 1,110
    Seen: 19 hrs ago
    Round-trip
    Business

    Manila (MNL)to

    Nagoya (NGO)
    12 Oct 2026 - 16 Oct 2026
    From
    USD 1,232
    Seen: 1 day ago
    Round-trip
    Business

    Manila (MNL)to

    Tokyo (HND)
    06 Dec 2026 - 12 Dec 2026
    From
    USD 1,260
    Seen: 13 hrs ago
    Round-trip
    Business

  • Manila (MNL)to

    Tokyo (HND)
    17 Nov 2026 - 25 Nov 2026
    From
    USD 1,260
    Seen: 1 day ago
    Round-trip
    Business

    Manila (MNL)to

    Tokyo (HND)
    20 Nov 2026 - 25 Nov 2026
    From
    USD 1,260
    Seen: 9 hrs ago
    Round-trip
    Business

    Manila (MNL)to

    Fukuoka (FUK)
    03 Dec 2026 - 08 Dec 2026
    From
    USD 1,356
    Seen: 1 day ago
    Round-trip
    Business

    Manila (MNL)to

    Fukuoka (FUK)
    28 Oct 2026 - 01 Nov 2026
    From
    USD 1,356
    Seen: 1 day ago
    Round-trip
    Business

  • Manila (MNL)to

    Fukuoka (FUK)
    10 Oct 2026 - 17 Oct 2026
    From
    USD 1,356
    Seen: 1 day ago
    Round-trip
    Business

    Manila (MNL)to

    Fukuoka (FUK)
    29 Sep 2026 - 05 Oct 2026
    From
    USD 1,356
    Seen: 1 day ago
    Round-trip
    Business

    Manila (MNL)to

    Nagoya (NGO)
    19 Sep 2026 - 21 Sep 2026
    From
    USD 1,360
    Seen: 17 hrs ago
    Round-trip
    Business

    Manila (MNL)to

    Nagoya (NGO)
    12 Oct 2026 - 17 Oct 2026
    From
    USD 1,362
    Seen: 1 day ago
    Round-trip
    Business

  • Manila (MNL)to

    Nagoya (NGO)
    29 Oct 2026 - 05 Nov 2026
    From
    USD 1,362
    Seen: 7 hrs ago
    Round-trip
    Business

    Manila (MNL)to

    Osaka (KIX)
    08 Nov 2026 - 15 Nov 2026
    From
    USD 1,463
    Seen: 1 day ago
    Round-trip
    Business

    Manila (MNL)to

    Osaka (KIX)
    04 Nov 2026 - 08 Nov 2026
    From
    USD 1,463
    Seen: 5 hrs ago
    Round-trip
    Business

    Manila (MNL)to

    Osaka (KIX)
    15 Nov 2026 - 22 Nov 2026
    From
    USD 1,463
    Seen: 2 hrs ago
    Round-trip
    Business
Fares displayed have been collected within the last 48hrs and may no longer be available at time of booking. Quoted fares includes taxes, fees, and surcharges except PH Travel Tax which is added at the passenger's option during or after the booking.

Explore popular destinations with Philippine Airlines!

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Explore popular destinations with Philippine Airlines!
From
To
Fare Type
Dates
Price
Manila (MNL)Osaka (KIX)Round-trip
/
Economy		15 Jan 2027 - 19 Jan 2027

From

USD 205

Seen: 1 day ago

Manila (MNL)Nagoya (NGO)Round-trip
/
Economy		18 Apr 2027 - 30 Apr 2027

From

USD 254

Seen: 14 hrs ago

Manila (MNL)Nagoya (NGO)Round-trip
/
Economy		29 Apr 2027 - 06 May 2027

From

USD 312

Seen: 1 day ago

Manila (MNL)Fukuoka (FUK)Round-trip
/
Economy		18 Feb 2027 - 23 Feb 2027

From

USD 326

Seen: 1 day ago

Manila (MNL)Fukuoka (FUK)Round-trip
/
Economy		16 May 2027 - 24 May 2027

From

USD 326

Seen: 1 day ago

Manila (MNL)Tokyo (NRT)Round-trip
/
Economy		20 Feb 2027 - 20 Feb 2027

From

USD 332

Seen: 1 day ago

*Fares displayed have been collected within the last 48hrs and may no longer be available at time of booking. Fares are quoted with taxes, fees, and surcharges except PH Travel Tax paid at the airport.

Our most searched flights on PAL from Manila to Japan

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Manila (MNL)to

Nagoya (NGO)
06 Oct 2026 - 08 Oct 2026
From
USD 310
Seen: 23 hrs ago
Round-trip
Economy

Manila (MNL)to

Nagoya (NGO)
09 Oct 2026 - 14 Oct 2026
From
USD 310
Seen: 12 hrs ago
Round-trip
Economy

Manila (MNL)to

Tokyo (NRT)
23 Oct 2026 - 02 Nov 2026
From
USD 323
Seen: 20 hrs ago
Round-trip
Economy

Manila (MNL)to

Tokyo (NRT)
06 Dec 2026 - 11 Dec 2026
From
USD 340
Seen: 4 hrs ago
Round-trip
Economy

Manila (MNL)to

Osaka (KIX)
11 Nov 2026 - 11 Nov 2026
From
USD 353
Seen: 15 hrs ago
Round-trip
Economy

Manila (MNL)to

Osaka (KIX)
09 Dec 2026 - 14 Dec 2026
From
USD 353
Seen: 1 day ago
Round-trip
Economy

Manila (MNL)to

Fukuoka (FUK)
11 Nov 2026 - 18 Nov 2026
From
USD 356
Seen: 1 day ago
Round-trip
Economy

Manila (MNL)to

Fukuoka (FUK)
06 Dec 2026 - 10 Dec 2026
From
USD 356
Seen: 1 day ago
Round-trip
Economy

Manila (MNL)to

Tokyo (HND)
11 Oct 2026 - 21 Oct 2026
From
USD 410
Seen: 1 day ago
Round-trip
Economy

Manila (MNL)to

Tokyo (HND)
05 Nov 2026 - 12 Nov 2026
From
USD 425
Seen: 1 day ago
Round-trip
Economy

Manila (MNL)to

Sapporo (CTS)
24 Nov 2026 - 28 Nov 2026
From
USD 517
Seen: 8 hrs ago
Round-trip
Economy

Manila (MNL)to

Sapporo (CTS)
02 Dec 2026 - 05 Dec 2026
From
USD 577
Seen: 11 hrs ago
Round-trip
Economy

Manila (MNL)to

Okinawa (OKA)
23 Nov 2026 - 07 Dec 2026
From
USD 900
Seen: 1 day ago
Round-trip
Economy

Manila (MNL)to

Toyama (TOY)
02 Nov 2026 - 08 Nov 2026
From
USD 952
Seen: 1 day ago
Round-trip
Economy
*Fares displayed have been collected within the last 48hrs and may no longer be available at time of booking. Quoted fares includes taxes, fees, and surcharges except PH Travel Tax paid at the airport.