Manila to Japan Flights on Philippine Airlines from USD 157* ALL-IN!

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*ALL-IN fares includes taxes, fees, and surcharges except applicable Philippine Travel Tax which at passenger's option can be added separately during or after the booking.

Popular PAL Flight Deals Manila Japan!

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Manila (MNL)to

Tokyo (NRT)
09 Apr 2026 - 16 Apr 2026

Round-trip

Economy

From
USD 157
Seen: 1 hour ago

Manila (MNL)to

Fukuoka (FUK)
07 Jun 2026 - 20 Jun 2026

Round-trip

Economy

From
USD 218
Seen: 7 hrs ago

Manila (MNL)to

Fukuoka (FUK)
06 Jun 2026 - 09 Jun 2026

Round-trip

Economy

From
USD 218
Seen: 18 hrs ago

Manila (MNL)to

Tokyo (NRT)
04 Jun 2026 - 09 Jun 2026

Round-trip

Economy

From
USD 237
Seen: 3 hrs ago

Manila (MNL)to

Tokyo (TYO)
08 Jun 2026 - 21 Jun 2026

Round-trip

Economy

From
USD 237
Seen: 1 day ago

Manila (MNL)to

Tokyo (HND)
08 Jun 2026 - 19 Jun 2026

Round-trip

Economy

From
USD 237
Seen: 1 day ago

Manila (MNL)to

Tokyo (HND)
02 Jun 2026 - 09 Jun 2026

Round-trip

Economy

From
USD 237
Seen: 20 hrs ago

Manila (MNL)to

Tokyo (TYO)
08 Jun 2026 - 05 Oct 2026

Round-trip

Economy

From
USD 247
Seen: 1 day ago

Manila (MNL)to

Nagoya (NGO)
07 Jun 2026 - 13 Jun 2026

Round-trip

Economy

From
USD 252
Seen: 5 hrs ago

Manila (MNL)to

Osaka (KIX)
24 Apr 2026 - 09 Mar 2027

Round-trip

Economy

From
USD 264
Seen: 3 hrs ago

Manila (MNL)to

Osaka (KIX)
02 Jun 2026 - 10 Jun 2026

Round-trip

Economy

From
USD 265
Seen: 1 day ago

Manila (MNL)to

Nagoya (NGO)
02 Jun 2026 - 06 Jun 2026

Round-trip

Economy

From
USD 282
Seen: 23 hrs ago

Manila (MNL)to

Okinawa (OKA)
03 Jun 2026 - 22 Oct 2026

Round-trip

Economy

From
USD 393
Seen: 23 hrs ago

Manila (MNL)to

Sapporo (CTS)
18 Mar 2026 - 25 Mar 2026

Round-trip

Economy

From
USD 558
Seen: 21 hrs ago

Manila (MNL)to

Sapporo (CTS)
20 Mar 2026 - 25 Mar 2026

Round-trip

Economy

From
USD 608
Seen: 3 hrs ago

Manila (MNL)to

Okinawa (OKA)
20 May 2026 - 27 May 2026

Round-trip

Economy

From
USD 667
Seen: 19 hrs ago

Manila (MNL)to

Akita (AXT)
28 May 2026 - 31 May 2026

Round-trip

Economy

From
USD 713
Seen: 1 day ago

Manila (MNL)to

Akita (AXT)
20 Apr 2026 - 26 Apr 2026

Round-trip

Economy

From
USD 859
Seen: 13 hrs ago

Manila (MNL)to

Nagasaki (NGS)
29 Apr 2026 - 01 May 2026

Round-trip

Economy

From
USD 885
Seen: 1 day ago

Fares displayed have been collected within the last 48hrs and may no longer be available at time of booking. Quoted fares includes taxes, fees, and surcharges except PH Travel Tax which is added at the passenger's option during or after the booking.

Popular PAL Business Class Flight Deals Manila Japan!

Fares displayed have been collected within the last 48hrs and may no longer be available at time of booking. Quoted fares includes taxes, fees, and surcharges except PH Travel Tax which is added at the passenger's option during or after the booking.

Explore new destinations with Philippine Airlines! Popular Flights from Manila to Japan

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Explore new destinations with Philippine Airlines! Popular Flights from Manila to Japan
From
To
Fare Type
Dates
Price
Manila (MNL)Fukuoka (FUK)Round-trip
/
Economy
03 Mar 2027 - 07 Mar 2027

From

USD 164

Seen: 2 hrs ago

Manila (MNL)Osaka (KIX)Round-trip
/
Economy
15 Jun 2026 - 31 Jan 2027

From

USD 170

Seen: 1 day ago

Manila (MNL)Osaka (KIX)Round-trip
/
Economy
19 Nov 2026 - 24 Nov 2026

From

USD 195

Seen: 2 hrs ago

Manila (MNL)Fukuoka (FUK)Round-trip
/
Economy
16 Sep 2026 - 23 Sep 2026

From

USD 198

Seen: 7 hrs ago

Manila (MNL)Tokyo (NRT)Round-trip
/
Economy
15 Oct 2026 - 19 Oct 2026

From

USD 202

Seen: 15 hrs ago

Manila (MNL)Tokyo (NRT)Round-trip
/
Economy
01 Oct 2026 - 07 Oct 2026

From

USD 202

Seen: 2 hrs ago

*Fares displayed have been collected within the last 48hrs and may no longer be available at time of booking. Fares are quoted with taxes, fees, and surcharges except PH Travel Tax paid at the airport.

Our Most Searched Flights on PAL from Manila to Japan

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Manila (MNL)to

Tokyo (NRT)
09 Apr 2026 - 16 Apr 2026
From
USD 157
Seen: 1 hour ago
Round-trip
Economy

Manila (MNL)to

Fukuoka (FUK)
07 Jun 2026 - 20 Jun 2026
From
USD 218
Seen: 7 hrs ago
Round-trip
Economy

Manila (MNL)to

Fukuoka (FUK)
06 Jun 2026 - 09 Jun 2026
From
USD 218
Seen: 18 hrs ago
Round-trip
Economy

Manila (MNL)to

Tokyo (NRT)
04 Jun 2026 - 09 Jun 2026
From
USD 237
Seen: 3 hrs ago
Round-trip
Economy

Manila (MNL)to

Tokyo (TYO)
08 Jun 2026 - 21 Jun 2026
From
USD 237
Seen: 1 day ago
Round-trip
Economy

Manila (MNL)to

Tokyo (HND)
08 Jun 2026 - 19 Jun 2026
From
USD 237
Seen: 1 day ago
Round-trip
Economy

Manila (MNL)to

Tokyo (HND)
02 Jun 2026 - 09 Jun 2026
From
USD 237
Seen: 20 hrs ago
Round-trip
Economy

Manila (MNL)to

Tokyo (TYO)
08 Jun 2026 - 05 Oct 2026
From
USD 247
Seen: 1 day ago
Round-trip
Economy

Manila (MNL)to

Nagoya (NGO)
07 Jun 2026 - 13 Jun 2026
From
USD 252
Seen: 5 hrs ago
Round-trip
Economy

Manila (MNL)to

Osaka (KIX)
24 Apr 2026 - 09 Mar 2027
From
USD 264
Seen: 3 hrs ago
Round-trip
Economy

Manila (MNL)to

Osaka (KIX)
02 Jun 2026 - 10 Jun 2026
From
USD 265
Seen: 1 day ago
Round-trip
Economy

Manila (MNL)to

Nagoya (NGO)
02 Jun 2026 - 06 Jun 2026
From
USD 282
Seen: 23 hrs ago
Round-trip
Economy

Manila (MNL)to

Okinawa (OKA)
03 Jun 2026 - 22 Oct 2026
From
USD 393
Seen: 23 hrs ago
Round-trip
Economy

Manila (MNL)to

Sapporo (CTS)
18 Mar 2026 - 25 Mar 2026
From
USD 558
Seen: 21 hrs ago
Round-trip
Economy

Manila (MNL)to

Sapporo (CTS)
20 Mar 2026 - 25 Mar 2026
From
USD 608
Seen: 3 hrs ago
Round-trip
Economy

Manila (MNL)to

Okinawa (OKA)
20 May 2026 - 27 May 2026
From
USD 667
Seen: 19 hrs ago
Round-trip
Economy

Manila (MNL)to

Akita (AXT)
28 May 2026 - 31 May 2026
From
USD 713
Seen: 1 day ago
Round-trip
Economy

Manila (MNL)to

Akita (AXT)
20 Apr 2026 - 26 Apr 2026
From
USD 859
Seen: 13 hrs ago
Round-trip
Economy

Manila (MNL)to

Nagasaki (NGS)
29 Apr 2026 - 01 May 2026
From
USD 885
Seen: 1 day ago
Round-trip
Economy

*Fares displayed have been collected within the last 48hrs and may no longer be available at time of booking. Quoted fares includes taxes, fees, and surcharges except PH Travel Tax paid at the airport.